Well THAT’S messy

Posted: October 7th, 2014 | Author: | Filed under: Linux, Scripting | Comments Off

for file in ../connections_2014-10-7-1*; do conn="-c ../connections_"`echo $file | cut -d "_" -f 2`; types="-t ../neuron_types_"`echo $file | cut -d "_" -f 2`; locs="-l ../locations_"`echo $file | cut -d "_" -f 2`; ./pickle_to_json.py $conn $types $locs; done

For all the connection files that were generated today, create three variables called “conn”, “types”, and “locs” that have a command line switch path in them generated from a fixed prefix and a cut from the connection file name. Then invoke the script “pickle_to_json.py” with those variables as arguments.

Effectively, the connection, neuron type, and location files are all related by their date, so this makes a single JSON file out of the multiple files. I just didn’t want to run pickle_to_json.py a bunch of times by hand, as that seemed error-prone.


USB parallel ports under Python on Ubuntu

Posted: May 23rd, 2014 | Author: | Filed under: Arduino, Electronics, Flame Effects, Programming | Comments Off

I have this PCB designed to control four flame effects. Instead of running it on the Arduino, I’m doing an FFT on a laptop and trying to control the solenoid drivers through a USB parallel port adapter on the laptop.

Ubuntu recognizes the USB parallel port adapter, and gives me a port in /dev/usb/lp0. I don’t have permissions to access it, because its user and group are root and lp, and I’m neither of those. The specific error is:

>>> p = parallel.Parallel('/dev/usb/lp0')
Traceback (most recent call last):
  File "", line 1, in
  File "/usr/lib/python2.7/dist-packages/parallel/parallelppdev.py", line 187, in __init__
    self._fd = os.open(self.device, os.O_RDWR)
OSError: [Errno 13] Permission denied: '/dev/usb/lp0'

sudo chmod o+rw /dev/usb/lp0 doesn’t get me any closer, because whatever python-parallel does under the hood is not a legit operation on that dev entry.

>>> p = parallel.Parallel("/dev/usb/lp0")
Traceback (most recent call last):
  File "", line 1, in
  File "/usr/lib/python2.7/dist-packages/parallel/parallelppdev.py", line 189, in __init__
    self.PPEXCL()
  File "/usr/lib/python2.7/dist-packages/parallel/parallelppdev.py", line 241, in PPEXCL
   fcntl.ioctl(self._fd, PPEXCL)
IOError: [Errno 25] Inappropriate ioctl for device

The /dev/usb/lp0 device entry appears to be created by the usblp module. I have a suspicion that what’s going on here is that the device entry created by usblp isn’t claimable the way one created by ppdev would be.

Using rmmod to get rid of usblp doesn’t work, it just gets restarted when I re-insert the USB connector for the adapter. Blacklisting it in /etc/modprobe.d/blacklist.conf just means that the /dev entry doesn’t get created, not that ppdev takes over.

Most reports online also indicate that USB parallel ports don’t really act like parallel ports, but only work for connecting parallel printers. Since I’ve already wasted enough time on this, it’s time to go with plan B. I’m going to fully populate the board, so that it has an Arduino on it, and then interface to that using serial commands and possibly Processing or OpenFrameworks.


Splitting a CSV file into a bunch of columns

Posted: March 26th, 2014 | Author: | Filed under: Research, Scripting | Comments Off

awk -F, '{for(i=1;i<=NF;i++){print $i > "sample"i".csv"}}' yourfile.csv

Does what is says on the tin. Splits your CSV file into a bunch of files, one for each column of the original files. Found here.

I’m using this to pull single channels out of a 60 channel file full of recorded neuron voltages, which I’m then throwing through a little filter test program that I whipped up using this filter library. My main goal is getting rid of 60Hz line noise, but the fluorescent bulbs in the room apparently also make noise at 180Hz and 300Hz.


I waste time to not waste time

Posted: March 3rd, 2014 | Author: | Filed under: B work, Linux | Comments Off

I’m using a web server on my local machine plus an edited /etc/hosts file to serve up a page that reminds me to get back to work when I should be getting back to work, rather than, say, reading facebook. Yes, I can get around this by clearing my hosts file, but that makes it work to get to the blocked sites, and if I’m going to be doing work, it’s not time-wasting is it?

The hosts file looks like this:

ams@robot-lab7:~/weblock$ cat /etc/hosts
127.0.0.1 localhost.localdomain localhost
#I elided a couple of lines here
127.0.0.1 www.facebook.com facebook.com
127.0.0.1 www.dresdencodak.com dresdencodak.com
127.0.0.1 www.xkcd.com xkcd.com
127.0.0.1 www.boingboing.net boingboing.net
127.0.0.1 ab3nd.livejournal.com livejournal.com
127.0.0.1 www.questionablecontent.net questionablecontent.net
127.0.0.1 www.hackday.com hackaday.com

# The following lines are desirable for IPv6 capable hosts
::1 localhost ip6-localhost ip6-loopback
fe00::0 ip6-localnet
ff00::0 ip6-mcastprefix
ff02::1 ip6-allnodes
ff02::2 ip6-allrouters
ff02::3 ip6-allhosts

That takes care of redirecting a lot of pages to localhost, rather than their real IP addresses. On my computer, I have a little web server, which is launched with the command
sudo webfsd -p 80 -f index.htm -u ams -r /home/ams/weblock/

Webfs, and it’s daemon part webfsd, is a static-file-only http server. In this invocation, it runs as my user after binding to port 80 as root, and serves the file index.htm out of the directory /home/ams/weblock. That file is a very simple HTML file:




<br /> You Should Be Working<br />

What should you be doing?




It just shows the text “What should you be doing?” in the middle of the page. This is also interesting because it shows how to center HTML content in the middle of the page, at least for small content. I’m not sure how well this works with larger or more complex content.


I’ve been had!

Posted: February 12th, 2014 | Author: | Filed under: Electronics, Reverse Engineering | Comments Off

I got a “5600mAh” power bank from Aliexpress. It’s an electronic item direct from China at low, low prices, so I assumed it was going to not measure up in some way or other, but until I got it, I didn’t know how.

Overall, the build quality isn’t bad. The case is molded plastic, and snaps together. It’s nice looking and feels solid. The power management PCB in it seems to have good quality solder joints. Not too shabby, and I don’t expect it to catch fire or anything.

The batteries, on the other hand, are where it falls down. The device has two cells in it, 18650 size, 1200mAh each (if their labels are to be believed). They are in parallel, which gets me a total of 2400mAh. That’s slightly more than half of the advertised capacity. Since 5600 isn’t an even multiple of 1200, there’s no way they could get 5600mAh using these batteries, even if they did want a product that could live up to their claims.

For ~$9, I don’t think it’s worth making a fuss over, but now I know what to expect from this device.


“Weaponized” Quadcopters

Posted: February 4th, 2014 | Author: | Filed under: Bad Ideas, Lasers, Robotics, Security | Comments Off

For a long time, I’ve been thinking it would be possible to strap a small explosively-formed penetrator (EFP) to a quadcopter. Then you feed the GPS coordinates of your enemy’s apartment or office into the on-board navigation system, and the quadcopter flies over to their place and fires a hypersonic slug of copper through their window.

Leaving aside the ethical concerns, there are a couple of issues with this. The main one for asymmetric warfare enthusiasts is that it destroys your quadcopter and leaves bits of it at the scene, which wastes resources and gives clues to whoever you were trying to shoot.

Then I saw this little post over at Hackaday. If you put a high wattage diode laser on a quadcopter, you can have it set fire to things. It could probably shoot through a glass window and set fire to things on the inside of the window. Once the place is nicely in flames, you just fly the ‘copter away again, leaving no trace.


Un-ubuntuing Ubuntu…

Posted: February 3rd, 2014 | Author: | Filed under: Linux | Comments Off

..post one of several million, no doubt. Ubuntu is pretty good, but persists in making what I’d regard as irritating desktop usability blunders. One of them is the use of “overlay scrollbars” which are scrollbars that are mostly hidden until you mouse over them. I found this annoying, but whatever, I can deal. It even more or less works, most of the time.

However, it breaks Inkscape. Inkscape’s color picker is a long strip of color patches, which you can click to select stroke and fill colors for drawings. The color picker has a scrollbar. If overlay scrollbars are on, then the entire area of the color picker ends up being the mouse-over area for the overlay scrollbar, so you can’t pick colors.

The fix is to issue the command “gsettings set com.canonical.desktop.interface scrollbar-mode normal” from the command line.


Useful mencoder invocation

Posted: February 3rd, 2014 | Author: | Filed under: Linux, Scripting | Comments Off

mencoder -nosound mf://*.jpg -mf w=1280:h=800:type=jpg:fps=30 -ovc lavc -lavcopts vcodec=mpeg4:vbitrate=2400:mbd=2:keyint=132:v4mv:vqmin=3:lumi_mask=0.07:dark_mask=0.2:mpeg_quant:scplx_mask=0.1:tcplx_mask=0.1:naq -o output_filename.avi

Turns all the JPEG files in the directory you are currently in into a nice quality MPEG-4/AVI file. The width and height in the options after -mf should be changed to match the images. This command line also works for PNG files if you replace both instances of “jpg” with “png”.


Naming things and “ImportError: No module named msg”

Posted: December 10th, 2013 | Author: | Filed under: Programming, Robotics, Scripting | Comments Off

I’m using ROS at school for a project. Part of the project is to detect someone’s hand with a camera, so I’m just looking for a patch of “skin colored*” pixels. ROS organizes software as packages, with nodes in them, and messages that the nodes use to communicate with each other.

For my system, I had a package called “hand_detector” with a source file called “hand_detector.py” and a message type called “hand”. ROS generates the messages, which I then import into my python code with the line:

from hand_detector.msg import *

This gets me the error message: “ImportError: No module named msg”

The reason for this is that python searches the same directory as the executing script for imports before it goes looking anywhere else. Since the file hand_detector.py is the executing script, and is naturally in the directory with itself, python finds it there, imports it into itself, and then tries to find a module called “msg” within hand_detector.py. There’s no .msg in there, so I get the error.

The moral of the story here is don’t name your package and the script in it the same thing. Once I converted the script to just “detector.py”, the problem went away.

*I’m somewhat concerned that I wrote a “white people detector”, as it’s really just thresholding the H part of the HSV color space and counting pixels. Other color spaces may be better for this, but this doesn’t have to be perfect. I just don’t want the robot to be a dick to black people.


Direct-to-PCB laser printing

Posted: November 19th, 2013 | Author: | Filed under: B work, Making, Soft Circuits | Comments Off

“Also, contrary to popular belief, there’s no issue with laser printing on a conductive surface.” – from here.

I’ve seen this in operation at Worcester Polytechnic Institute. There, the flexible/soft robotics lab uses copper tape on plastic substrate to make PCBs, sticks them to a sheet of paper, and runs it through a totally-normal, unhacked laser printer. Copper tape is probably thinner than PCB copper, so it ends up not sinking too much heat away from the fuser. The resulting PCBs can be etched right out of the printer, with no ironing step in the middle.

I have to hit a hardware store at some point this week, perhaps I’ll be able to get copper tape there.